Prevalence and Phylogeny of Coronaviruses in Wild Birds from the Bering Strait Area (Beringia)
Identifieur interne : 002478 ( Main/Exploration ); précédent : 002477; suivant : 002479Prevalence and Phylogeny of Coronaviruses in Wild Birds from the Bering Strait Area (Beringia)
Auteurs : Shaman Muradrasoli [Suède] ; Ádám Bálint [Suède] ; John Wahlgren [Suède] ; Jonas Waldenström [Suède] ; Sándor Belák [Suède] ; Jonas Blomberg [Suède] ; Björn Olsen [Suède]Source :
- PLoS ONE [ 1932-6203 ] ; 2010.
Descripteurs français
- KwdFr :
- MESH :
- isolement et purification : Coronavirus.
- virologie : Maladies des oiseaux, Oiseaux.
- épidémiologie : Maladies des oiseaux.
- Animaux, Animaux sauvages, Coronavirus, Données de séquences moléculaires, Phylogénie, RT-PCR, Spécificité d'espèce.
English descriptors
- KwdEn :
- MESH :
- classification : Coronavirus.
- epidemiology : Bird Diseases.
- isolation & purification : Coronavirus.
- virology : Bird Diseases, Birds.
- Animals, Animals, Wild, Molecular Sequence Data, Phylogeny, Reverse Transcriptase Polymerase Chain Reaction, Species Specificity.
Abstract
Coronaviruses (CoVs) can cause mild to severe disease in humans and animals, their host range and environmental spread seem to have been largely underestimated, and they are currently being investigated for their potential medical relevance. Infectious bronchitis virus (IBV) belongs to gamma-coronaviruses and causes a costly respiratory viral disease in chickens. The role of wild birds in the epidemiology of IBV is poorly understood. In the present study, we examined 1,002 cloacal and faecal samples collected from 26 wild bird species in the Beringia area for the presence of CoVs, and then we performed statistical and phylogenetic analyses. We detected diverse CoVs by RT-PCR in wild birds in the Beringia area. Sequence analysis showed that the detected viruses are gamma-coronaviruses related to IBV. These findings suggest that wild birds are able to carry gamma-coronaviruses asymptomatically. We concluded that CoVs are widespread among wild birds in Beringia, and their geographic spread and frequency is higher than previously realised. Thus, Avian CoV can be efficiently disseminated over large distances and could be a genetic reservoir for future emerging pathogenic CoVs. Considering the great animal health and economic impact of IBV as well as the recent emergence of novel coronaviruses such as SARS-coronavirus, it is important to investigate the role of wildlife reservoirs in CoV infection biology and epidemiology.
Url:
DOI: 10.1371/journal.pone.0013640
PubMed: 21060827
PubMed Central: 2966397
Affiliations:
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last="Muradrasoli">Shaman Muradrasoli</name><affiliation wicri:level="4"><nlm:aff id="aff1"><addr-line>Section of Clinical Virology, Department of Medical Sciences, Uppsala University, Uppsala, Sweden</addr-line></nlm:aff><country xml:lang="fr">Suède</country><wicri:regionArea>Section of Clinical Virology, Department of Medical Sciences, Uppsala University, Uppsala</wicri:regionArea><orgName type="university">Université d'Uppsala</orgName><placeName><settlement type="city">Uppsala</settlement><region nuts="1">Svealand</region><region nuts="1">East Middle Sweden</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="aff2"><addr-line>Section for Bacteriology and Food Safety, Department of Biomedical Sciences and Veterinary Public Health, Swedish University of Agricultural Sciences, Uppsala, Sweden</addr-line></nlm:aff><country xml:lang="fr">Suède</country><wicri:regionArea>Section for Bacteriology and Food Safety, Department of Biomedical Sciences and Veterinary 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wicri:level="3"><nlm:aff id="aff4"><addr-line>Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Stockholm, Sweden</addr-line></nlm:aff><country xml:lang="fr">Suède</country><wicri:regionArea>Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Stockholm</wicri:regionArea><placeName><settlement type="city">Stockholm</settlement><region nuts="2">Svealand</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="aff5"><addr-line>Swedish Institute for Infectious Disease Control, Solna, Sweden</addr-line></nlm:aff><country xml:lang="fr">Suède</country><wicri:regionArea>Swedish Institute for Infectious Disease Control, Solna</wicri:regionArea><wicri:noRegion>Solna</wicri:noRegion></affiliation></author><author><name sortKey="Waldenstrom, Jonas" sort="Waldenstrom, Jonas" uniqKey="Waldenstrom J" first="Jonas" last="Waldenström">Jonas Waldenström</name><affiliation wicri:level="1"><nlm:aff id="aff5"><addr-line>Swedish Institute for Infectious Disease Control, Solna, Sweden</addr-line></nlm:aff><country xml:lang="fr">Suède</country><wicri:regionArea>Swedish Institute for Infectious Disease Control, Solna</wicri:regionArea><wicri:noRegion>Solna</wicri:noRegion></affiliation></author><author><name sortKey="Belak, Sandor" sort="Belak, Sandor" uniqKey="Belak S" first="Sándor" last="Belák">Sándor Belák</name><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>The Joint Research and Development Division, Departments of Virology and Parasitology, Swedish University of Agricultural Sciences and the National Veterinary Institute, Uppsala, Sweden</addr-line></nlm:aff><country xml:lang="fr">Suède</country><wicri:regionArea>The Joint Research and Development Division, Departments of Virology and Parasitology, Swedish University of Agricultural Sciences and the National Veterinary Institute, Uppsala</wicri:regionArea><wicri:noRegion>Uppsala</wicri:noRegion></affiliation></author><author><name sortKey="Blomberg, 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xml:lang="fr">Suède</country><wicri:regionArea>Section for Zoonotic Ecology and Epidemiology, Linneaus University, Kalmar</wicri:regionArea><wicri:noRegion>Kalmar</wicri:noRegion></affiliation><affiliation wicri:level="4"><nlm:aff id="aff7"><addr-line>Section of Infectious Diseases, Department of Medical Sciences, Uppsala University, Uppsala, Sweden</addr-line></nlm:aff><country xml:lang="fr">Suède</country><wicri:regionArea>Section of Infectious Diseases, Department of Medical Sciences, Uppsala University, Uppsala</wicri:regionArea><orgName type="university">Université d'Uppsala</orgName><placeName><settlement type="city">Uppsala</settlement><region nuts="1">Svealand</region><region nuts="1">East Middle Sweden</region></placeName></affiliation></author></analytic><series><title level="j">PLoS ONE</title><idno type="eISSN">1932-6203</idno><imprint><date when="2010">2010</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals</term><term>Animals, Wild</term><term>Bird Diseases (epidemiology)</term><term>Bird Diseases (virology)</term><term>Birds (virology)</term><term>Coronavirus (classification)</term><term>Coronavirus (isolation & purification)</term><term>Molecular Sequence Data</term><term>Phylogeny</term><term>Reverse Transcriptase Polymerase Chain Reaction</term><term>Species Specificity</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Animaux</term><term>Animaux sauvages</term><term>Coronavirus ()</term><term>Coronavirus (isolement et purification)</term><term>Données de séquences moléculaires</term><term>Maladies des oiseaux (virologie)</term><term>Maladies des oiseaux (épidémiologie)</term><term>Oiseaux (virologie)</term><term>Phylogénie</term><term>RT-PCR</term><term>Spécificité d'espèce</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="epidemiology" xml:lang="en"><term>Bird Diseases</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Maladies des oiseaux</term><term>Oiseaux</term></keywords><keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Bird Diseases</term><term>Birds</term></keywords><keywords scheme="MESH" qualifier="épidémiologie" xml:lang="fr"><term>Maladies des oiseaux</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>Animals, Wild</term><term>Molecular Sequence Data</term><term>Phylogeny</term><term>Reverse Transcriptase Polymerase Chain Reaction</term><term>Species Specificity</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Animaux</term><term>Animaux sauvages</term><term>Coronavirus</term><term>Données de séquences moléculaires</term><term>Phylogénie</term><term>RT-PCR</term><term>Spécificité d'espèce</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Coronaviruses (CoVs) can cause mild to severe disease in humans and animals, their host range and environmental spread seem to have been largely underestimated, and they are currently being investigated for their potential medical relevance. Infectious bronchitis virus (IBV) belongs to gamma-coronaviruses and causes a costly respiratory viral disease in chickens. The role of wild birds in the epidemiology of IBV is poorly understood. In the present study, we examined 1,002 cloacal and faecal samples collected from 26 wild bird species in the Beringia area for the presence of CoVs, and then we performed statistical and phylogenetic analyses. We detected diverse CoVs by RT-PCR in wild birds in the Beringia area. Sequence analysis showed that the detected viruses are gamma-coronaviruses related to IBV. These findings suggest that wild birds are able to carry gamma-coronaviruses asymptomatically. We concluded that CoVs are widespread among wild birds in Beringia, and their geographic spread and frequency is higher than previously realised. Thus, Avian CoV can be efficiently disseminated over large distances and could be a genetic reservoir for future emerging pathogenic CoVs. Considering the great animal health and economic impact of IBV as well as the recent emergence of novel coronaviruses such as SARS-coronavirus, it is important to investigate the role of wildlife reservoirs in CoV infection biology and epidemiology.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Cavanagh, D" uniqKey="Cavanagh D">D Cavanagh</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gonzalez, Jm" uniqKey="Gonzalez J">JM Gonzalez</name></author><author><name sortKey="Gomez Puertas, P" uniqKey="Gomez Puertas P">P Gomez-Puertas</name></author><author><name sortKey="Cavanagh, D" uniqKey="Cavanagh D">D Cavanagh</name></author><author><name sortKey="Gorbalenya, Ae" uniqKey="Gorbalenya A">AE Gorbalenya</name></author><author><name sortKey="Enjuanes, L" uniqKey="Enjuanes L">L Enjuanes</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cao, J" uniqKey="Cao J">J 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Escutenaire</name></author><author><name sortKey="Mohamed, N" uniqKey="Mohamed N">N Mohamed</name></author><author><name sortKey="Isaksson, M" uniqKey="Isaksson M">M Isaksson</name></author><author><name sortKey="Thoren, P" uniqKey="Thoren P">P Thoren</name></author><author><name sortKey="Klingeborn, B" uniqKey="Klingeborn B">B Klingeborn</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hall, Ta" uniqKey="Hall T">TA Hall</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Tamura, K" uniqKey="Tamura K">K Tamura</name></author><author><name sortKey="Dudley, J" uniqKey="Dudley J">J Dudley</name></author><author><name sortKey="Nei, M" uniqKey="Nei M">M Nei</name></author><author><name sortKey="Kumar, S" uniqKey="Kumar S">S Kumar</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Felsenstein, J" uniqKey="Felsenstein J">J Felsenstein</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Suède</li></country><region><li>East Middle Sweden</li><li>Svealand</li></region><settlement><li>Stockholm</li><li>Uppsala</li></settlement><orgName><li>Université d'Uppsala</li></orgName></list><tree><country name="Suède"><region name="Svealand"><name sortKey="Muradrasoli, Shaman" sort="Muradrasoli, Shaman" uniqKey="Muradrasoli S" first="Shaman" last="Muradrasoli">Shaman Muradrasoli</name></region><name sortKey="Balint, Adam" sort="Balint, Adam" uniqKey="Balint A" first="Ádám" last="Bálint">Ádám Bálint</name><name sortKey="Belak, Sandor" sort="Belak, Sandor" uniqKey="Belak S" first="Sándor" last="Belák">Sándor Belák</name><name sortKey="Blomberg, Jonas" sort="Blomberg, Jonas" uniqKey="Blomberg J" first="Jonas" last="Blomberg">Jonas Blomberg</name><name sortKey="Muradrasoli, Shaman" sort="Muradrasoli, Shaman" uniqKey="Muradrasoli S" first="Shaman" last="Muradrasoli">Shaman Muradrasoli</name><name sortKey="Olsen, Bjorn" sort="Olsen, Bjorn" uniqKey="Olsen B" first="Björn" last="Olsen">Björn Olsen</name><name sortKey="Olsen, Bjorn" sort="Olsen, Bjorn" uniqKey="Olsen B" first="Björn" last="Olsen">Björn Olsen</name><name sortKey="Wahlgren, John" sort="Wahlgren, John" uniqKey="Wahlgren J" first="John" last="Wahlgren">John Wahlgren</name><name sortKey="Wahlgren, John" sort="Wahlgren, John" uniqKey="Wahlgren J" first="John" last="Wahlgren">John Wahlgren</name><name sortKey="Waldenstrom, Jonas" sort="Waldenstrom, Jonas" uniqKey="Waldenstrom J" first="Jonas" last="Waldenström">Jonas Waldenström</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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